If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ), 'gf_id' => 'HOM05D000534', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000534' ), 'data_identifier' => 'HOM05D000534', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000534', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1021', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p20760' => 'bna', 'A02p44630' => 'bna', 'A05p19590' => 'bna', 'A06p16930' => 'bna', 'A07p03540' => 'bna', 'A07p28460' => 'bna', 'A07p37510' => 'bna', 'A07p42190' => 'bna', 'A08p03030' => 'bna', 'A09p10230' => 'bna', 'A09p11410' => 'bna', 'Aa31LG1G14490' => 'aar', 'Aa31LG4G6640' => 'aar', 'Aa31LG5G11300' => 'aar', 'Aa31LG7G5110' => 'aar', 'Aa31LG8G14790' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.933' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2703' => 'aag', 'Actinidia04709' => 'ach', 'Actinidia11476' => 'ach', 'Actinidia14947' => 'ach', 'Actinidia15531' => 'ach', 'Actinidia15917' => 'ach', 'Actinidia15918' => 'ach', 'Actinidia22862' => 'ach', 'Actinidia28749' => 'ach', 'Actinidia29006' => 'ach', 'Actinidia36357' => 'ach', 'Ah.00g001030' => 'amhyb', 'Ah.02g113060' => 'amhyb', 'Ah.02g123090' => 'amhyb', 'Ah.02g123260' => 'amhyb', 'Ah.03g143120' => 'amhyb', 'Ah.03g147930' => 'amhyb', 'Ah.03g149190' => 'amhyb', 'Ah.04g166660' => 'amhyb', 'Ah.10g037890' => 'amhyb', 'Ah.16g101410' => 'amhyb', 'AL1G33950' => 'aly', 'AL2G30670' => 'aly', 'AL2G36660' => 'aly', 'AL3G50430' => 'aly', 'AL6G10040' => 'aly', 'AL8G45650' => 'aly', 'Aqoxy2G00177' => 'aox', 'Aqoxy3G03976' => 'aox', 'Aqoxy4G03317' => 'aox', 'Aqoxy5G00956' => 'aox', 'Aqoxy6G03028' => 'aox', 'Aqoxy6G03029' => 'aox', 'Aqoxy6G03030' => 'aox', 'Aqoxy6G03031' => 'aox', 'Aqoxy7G00769' => 'aox', 'arahy.Tifrunner.gnm1.ann1.00T38C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.07LUT5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.32WLBW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.36ACQJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.38DL7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3G7ZAR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6E8WTG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P23NP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.831XQD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WM705' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WQ7IH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6P7Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BAIH62' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GR4ZGT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H21211' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LM5V2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M37AJ6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M40XL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PQNB6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QNPC7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R5QH0H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RFT8S7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RJML5T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SG2P31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SLZ3WC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SXH82X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4D1ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WW3FN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XAH0DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YKZY74' => 'arhy', 'AT1G20925' => 'ath', 'AT1G71090' => 'ath', 'AT1G76520' => 'ath', 'AT1G76530' => 'ath', 'AT2G17500' => 'ath', 'AT5G01990' => 'ath', 'AT5G65980' => 'ath', 'ATR0326G037' => 'atr', 'ATR0605G383' => 'atr', 'ATR0807G076' => 'atr', 'ATR1127G075' => 'atr', 'Atru.chr1.1730' => 'acertr', 'Atru.chr1.1742' => 'acertr', 'Atru.chr1.3868' => 'acertr', 'Atru.chr11.388' => 'acertr', 'Atru.chr13.39' => 'acertr', 'Atru.chr2.618' => 'acertr', 'Atru.chr3.10' => 'acertr', 'Atru.chr3.12' => 'acertr', 'Atru.chr3.15' => 'acertr', 'Atru.chr3.16' => 'acertr', 'Atru.chr3.17' => 'acertr', 'Atru.chr3.18' => 'acertr', 'Atru.chr3.2028' => 'acertr', 'Atru.chr3.2029' => 'acertr', 'Atru.chr3.28' => 'acertr', 'Atru.chr5.135' => 'acertr', 'Atru.chr5.136' => 'acertr', 'Atru.chr8.56' => 'acertr', 'AUR62003331' => 'cqu', 'AUR62003711' => 'cqu', 'AUR62003733' => 'cqu', 'AUR62006456' => 'cqu', 'AUR62014134' => 'cqu', 'AUR62014168' => 'cqu', 'AUR62016561' => 'cqu', 'AUR62018022' => 'cqu', 'AUR62022314' => 'cqu', 'AUR62023209' => 'cqu', 'AUR62023255' => 'cqu', 'AUR62023902' => 'cqu', 'AUR62029514' => 'cqu', 'AUR62029515' => 'cqu', 'AUR62029516' => 'cqu', 'AUR62029517' => 'cqu', 'AUR62029518' => 'cqu', 'AUR62029519' => 'cqu', 'AUR62029812' => 'cqu', 'AUR62035140' => 'cqu', 'AUR62039561' => 'cqu', 'AUR62042911' => 'cqu', 'AUR62044144' => 'cqu', 'BcaB02g07067' => 'bca', 'BcaB02g11241' => 'bca', 'BcaB03g14871' => 'bca', 'BcaB03g16516' => 'bca', 'BcaB04g17231' => 'bca', 'BcaB04g17233' => 'bca', 'BcaB04g20131' => 'bca', 'BcaB05g24996' => 'bca', 'BcaB07g31726' => 'bca', 'BcaB07g32088' => 'bca', 'BcaC01g01251' => 'bca', 'BcaC03g15686' => 'bca', 'BcaC04g22968' => 'bca', 'BcaC04g23102' => 'bca', 'BcaC05g27338' => 'bca', 'BcaC06g36270' => 'bca', 'BcaC08g45523' => 'bca', 'BcaC08g46547' => 'bca', 'BcaC08g46551' => 'bca', 'BcaC08g47161' => 'bca', 'BcaNung05692' => 'bca', 'BolC2t09409H' => 'bol', 'BolC2t12561H' => 'bol', 'BolC3t21301H' => 'bol', 'BolC5t30658H' => 'bol', 'BolC5t31992H' => 'bol', 'BolC6t38325H' => 'bol', 'BolC6t39577H' => 'bol', 'BolC6t40101H' => 'bol', 'BolC7t40978H' => 'bol', 'BolC9t54104H' => 'bol', 'BolC9t54233H' => 'bol', 'BraA02t07109Z' => 'bra', 'BraA02t09379Z' => 'bra', 'BraA05t20863Z' => 'bra', 'BraA06t24802Z' => 'bra', 'BraA07t28144Z' => 'bra', 'BraA07t30482Z' => 'bra', 'BraA07t31308Z' => 'bra', 'BraA07t31748Z' => 'bra', 'BraA08t32337Z' => 'bra', 'BraA09t36668Z' => 'bra', 'BraA09t36781Z' => 'bra', 'C02p32900' => 'bna', 'C03p89790' => 'bna', 'C05p19560' => 'bna', 'C05p32590' => 'bna', 'C06p31990' => 'bna', 'C06p45210' => 'bna', 'C07p05760' => 'bna', 'C09p12120' => 'bna', 'C09p13430' => 'bna', 'CAN.G1238.31' => 'can', 'CAN.G1330.19' => 'can', 'CAN.G1693.13' => 'can', 'CAN.G1754.2' => 'can', 'CAN.G178.10' => 'can', 'CAN.G625.72' => 'can', 'CAN.G801.18' => 'can', 'CANSAT01G3042' => 'cansat', 'CANSAT11G1360' => 'cansat', 'CANSAT11G2541' => 'cansat', 'CANSAT25G2298' => 'cansat', 'CANSAT25G2997' => 'cansat', 'CANSAT54G0250' => 'cansat', 'CANSAT80G2056' => 'cansat', 'CARHR021390' => 'chi', 'CARHR064380' => 'chi', 'CARHR070070' => 'chi', 'CARHR070080' => 'chi', 'CARHR107660' => 'chi', 'CARHR212340' => 'chi', 'CARHR281780' => 'chi', 'Carub.0001s2040' => 'cru', 'Carub.0002s1791' => 'cru', 'Carub.0002s2343' => 'cru', 'Carub.0002s2344' => 'cru', 'Carub.0003s3135' => 'cru', 'Carub.0003s3156' => 'cru', 'Carub.0008s2854' => 'cru', 'Carub.0024s0005' => 'cru', 'Ca_02590_v3' => 'car', 'Ca_02843_v3' => 'car', 'Ca_07799_v3' => 'car', 'Ca_12183_v3' => 'car', 'Ca_14062_v3' => 'car', 'Ca_16569_v3' => 'car', 'Ca_22446_v3' => 'car', 'Ca_24991_v3' => 'car', 'Ca_25022_v3' => 'car', 'Ca_27117_v3' => 'car', 'Cc06_g00150' => 'ccan', 'Cc07_g08300' => 'ccan', 'Cc07_g12020' => 'ccan', 'Cc07_g12270' => 'ccan', 'Cc07_g12280' => 'ccan', 'Cc07_g12290' => 'ccan', 'Cc07_g12300' => 'ccan', 'Cc10_g00190' => 'ccan', 'Cc11_g08940' => 'ccan', 'CDE05G0858' => 'cde', 'CDE06G0403' => 'cde', 'CDE06G2799' => 'cde', 'CDE07G1030' => 'cde', 'CDE07G2063' => 'cde', 'Cfa007099' => 'cfa', 'Cfa007117' => 'cfa', 'Cfa007868' => 'cfa', 'Cfa008580' => 'cfa', 'Cfa011005' => 'cfa', 'Cfa014147' => 'cfa', 'Cfa016994' => 'cfa', 'Cfa023284' => 'cfa', 'Ciclev10001325m.g' => 'ccl', 'Ciclev10001450m.g' => 'ccl', 'Ciclev10003371m.g' => 'ccl', 'Ciclev10010809m.g' => 'ccl', 'Ciclev10011663m.g' => 'ccl', 'Ciclev10011730m.g' => 'ccl', 'Ciclev10013526m.g' => 'ccl', 'Ciclev10015208m.g' => 'ccl', 'Ciclev10023689m.g' => 'ccl', 'Ciclev10024499m.g' => 'ccl', 'Ciclev10025741m.g' => 'ccl', 'Ciclev10031658m.g' => 'ccl', 'CiPaw.03G066700' => 'cil', 'CiPaw.05G247900' => 'cil', 'CiPaw.06G013400' => 'cil', 'CiPaw.07G000300' => 'cil', 'CiPaw.07G000400' => 'cil', 'CiPaw.07G001000' => 'cil', 'CiPaw.07G132100' => 'cil', 'CiPaw.08G077600' => 'cil', 'CiPaw.09G224000' => 'cil', 'CiPaw.13G020700' => 'cil', 'CiPaw.13G070400' => 'cil', 'CiPaw.14G014600' => 'cil', 'CiPaw.14G014700' => 'cil', 'CiPaw.14G014800' => 'cil', 'CiPaw.14G014900' => 'cil', 'CiPaw.14G015000' => 'cil', 'CiPaw.14G015100' => 'cil', 'ClCG00G004870' => 'cla', 'ClCG01G006160' => 'cla', 'ClCG04G006110' => 'cla', 'ClCG10G000150' => 'cla', 'ClCG10G000170' => 'cla', 'ClCG11G019060' => 'cla', 'COL.COLO4_03302' => 'col', 'COL.COLO4_03585' => 'col', 'COL.COLO4_05369' => 'col', 'COL.COLO4_06156' => 'col', 'COL.COLO4_08062' => 'col', 'COL.COLO4_09870' => 'col', 'COL.COLO4_20456' => 'col', 'COL.COLO4_20582' => 'col', 'COL.COLO4_22564' => 'col', 'COL.COLO4_27131' => 'col', 'COL.COLO4_27233' => 'col', 'COL.COLO4_32915' => 'col', 'COL.COLO4_33716' => 'col', 'COL.COLO4_34183' => 'col', 'COL.COLO4_34186' => 'col', 'Cpa.g.c24967.2' => 'cpa', 'Cpa.g.sc0.46' => 'cpa', 'Cpa.g.sc55.11' => 'cpa', 'Cpa.g.sc6.357' => 'cpa', 'Cre13.g564850' => 'cre', 'Cre16.g680200' => 'cre', 'CsaV3_3G000160' => 'csa', 'CsaV3_3G000170' => 'csa', 'CsaV3_3G000190' => 'csa', 'CsaV3_4G027450' => 'csa', 'CsaV3_4G037660' => 'csa', 'CsaV3_5G028500' => 'csa', 'CSS0000275' => 'camsi', 'CSS0006341' => 'camsi', 'CSS0008291' => 'camsi', 'CSS0013463' => 'camsi', 'CSS0014287' => 'camsi', 'CSS0021061' => 'camsi', 'CSS0024478' => 'camsi', 'CSS0030307' => 'camsi', 'CSS0030994' => 'camsi', 'CSS0033224' => 'camsi', 'CSS0035185' => 'camsi', 'CSS0040249' => 'camsi', 'CSS0041860' => 'camsi', 'CSS0048210' => 'camsi', 'CSS0050423' => 'camsi', 'DCAR_011873' => 'dca', 'DCAR_013948' => 'dca', 'DCAR_014305' => 'dca', 'DCAR_017618' => 'dca', 'DCAR_017619' => 'dca', 'DCAR_023018' => 'dca', 'DCAR_023959' => 'dca', 'DCAR_024397' => 'dca', 'DCAR_024398' => 'dca', 'DCAR_029242' => 'dca', 'Dinv05147' => 'din', 'Dinv05890' => 'din', 'Dinv14865' => 'din', 'Dinv16200' => 'din', 'Dinv16932' => 'din', 'Dinv23334' => 'din', 'Dinv25372' => 'din', 'Dinv28294' => 'din', 'Dinv28309' => 'din', 'Dinv28310' => 'din', 'Dinv33984' => 'din', 'Dinv40202' => 'din', 'Dinv40223' => 'din', 'Dinv40225' => 'din', 'Duzib041G0347' => 'dzi', 'Duzib106G0543' => 'dzi', 'Duzib106G0713' => 'dzi', 'Duzib106G1294' => 'dzi', 'Duzib114G1001' => 'dzi', 'Duzib128G0915' => 'dzi', 'Duzib128G1142' => 'dzi', 'Duzib138G1112' => 'dzi', 'Duzib147G1559' => 'dzi', 'Duzib151G0320' => 'dzi', 'Duzib248G1003' => 'dzi', 'ECA232G0803' => 'eca', 'ECA238G0876' => 'eca', 'ECA238G1055' => 'eca', 'ECA238G3753' => 'eca', 'ECA238G4562' => 'eca', 'ECA246G0596' => 'eca', 'ECA246G3343' => 'eca', 'ECA247G2427' => 'eca', 'EL10Ac2g04510' => 'bvu', 'EL10Ac4g09684' => 'bvu', 'EL10Ac4g09685' => 'bvu', 'EL10Ac4g09686' => 'bvu', 'EL10Ac6g14247' => 'bvu', 'EL10Ac6g14715' => 'bvu', 'EL10Ac6g14718' => 'bvu', 'EL10Ac6g15039' => 'bvu', 'EL10Ac6g15054' => 'bvu', 'EL10Ac6g15159' => 'bvu', 'EL10Ac6g15515' => 'bvu', 'EL10Ac7g17143' => 'bvu', 'Eucgr.D01141' => 'egr', 'Eucgr.E03440' => 'egr', 'Eucgr.G02203' => 'egr', 'Eucgr.I02196' => 'egr', 'Eucgr.I02197' => 'egr', 'Eucgr.I02215' => 'egr', 'Eucgr.J01540' => 'egr', 'Eucgr.J02550' => 'egr', 'Eucgr.J02568' => 'egr', 'Eucgr.J02569' => 'egr', 'Eucgr.K01303' => 'egr', 'FAN02G2071' => 'fan', 'FAN04G2583' => 'fan', 'FAN04G2757' => 'fan', 'FAN04G2894' => 'fan', 'FAN05G2388' => 'fan', 'FAN07G2310' => 'fan', 'FAN08G0707' => 'fan', 'FAN08G2304' => 'fan', 'FAN09G3558' => 'fan', 'FAN12G1267' => 'fan', 'FAN13G2460' => 'fan', 'FAN13G2571' => 'fan', 'FAN14G5576' => 'fan', 'FAN18G0719' => 'fan', 'FAN18G1991' => 'fan', 'FAN18G3737' => 'fan', 'FAN19G0234' => 'fan', 'FAN19G2792' => 'fan', 'FAN23G1433' => 'fan', 'FAN23G1534' => 'fan', 'FAN26G0172' => 'fan', 'FAN26G1020' => 'fan', 'FAN28G2469' => 'fan', 'FvH4_1g10180' => 'fve', 'FvH4_1g29070' => 'fve', 'FvH4_4g32170' => 'fve', 'FvH4_5g26311' => 'fve', 'FvH4_5g26330' => 'fve', 'FvH4_5g26370' => 'fve', 'FvH4_6g09330' => 'fve', 'Glyma.01G156200' => 'gma', 'Glyma.01G157700' => 'gma', 'Glyma.03G113600' => 'gma', 'Glyma.07G113100' => 'gma', 'Glyma.07G113200' => 'gma', 'Glyma.09G116100' => 'gma', 'Glyma.09G195600' => 'gma', 'Glyma.09G196900' => 'gma', 'Glyma.09G271100' => 'gma', 'Glyma.10G189000' => 'gma', 'Glyma.10G189100' => 'gma', 'Glyma.11G087300' => 'gma', 'Glyma.11G088600' => 'gma', 'Glyma.16G114900' => 'gma', 'Glyma.16G115000' => 'gma', 'Glyma.16G115500' => 'gma', 'Glyma.16G115566' => 'gma', 'Glyma.18G218300' => 'gma', 'Glyma.19G072900' => 'gma', 'Glyma.20G201600' => 'gma', 'Gohir.A02G001300' => 'ghi', 'Gohir.A02G001350' => 'ghi', 'Gohir.A02G178900' => 'ghi', 'Gohir.A02G179200' => 'ghi', 'Gohir.A03G123100' => 'ghi', 'Gohir.A05G289500' => 'ghi', 'Gohir.A05G289600' => 'ghi', 'Gohir.A05G289700' => 'ghi', 'Gohir.A07G075800' => 'ghi', 'Gohir.A10G152000' => 'ghi', 'Gohir.A10G201033' => 'ghi', 'Gohir.A13G012100' => 'ghi', 'Gohir.D02G001600' => 'ghi', 'Gohir.D02G145700' => 'ghi', 'Gohir.D03G000500' => 'ghi', 'Gohir.D03G000800' => 'ghi', 'Gohir.D05G290900' => 'ghi', 'Gohir.D05G291000' => 'ghi', 'Gohir.D05G291100' => 'ghi', 'Gohir.D07G080200' => 'ghi', 'Gohir.D07G178700' => 'ghi', 'Gohir.D10G114300' => 'ghi', 'Gohir.D10G208700' => 'ghi', 'Gohir.D13G013200' => 'ghi', 'Gorai.001G085300' => 'gra', 'Gorai.001G199900' => 'gra', 'Gorai.003G000900' => 'gra', 'Gorai.003G001200' => 'gra', 'Gorai.005G002100' => 'gra', 'Gorai.005G163100' => 'gra', 'Gorai.009G306100' => 'gra', 'Gorai.009G306200' => 'gra', 'Gorai.009G306300' => 'gra', 'Gorai.011G126000' => 'gra', 'Gorai.011G234700' => 'gra', 'Gorai.013G014100' => 'gra', 'GSVIVG01011783001' => 'vvi', 'GSVIVG01012357001' => 'vvi', 'GSVIVG01022301001' => 'vvi', 'GSVIVG01022624001' => 'vvi', 'GSVIVG01022629001' => 'vvi', 'GSVIVG01026427001' => 'vvi', 'GSVIVG01026428001' => 'vvi', 'GSVIVG01026429001' => 'vvi', 'GSVIVG01026430001' => 'vvi', 'GSVIVG01026431001' => 'vvi', 'GSVIVG01026433001' => 'vvi', 'GSVIVG01026434001' => 'vvi', 'GSVIVG01029853001' => 'vvi', 'GSVIVG01030905001' => 'vvi', 'HanXRQChr02g0059891' => 'han', 'HanXRQChr09g0239721' => 'han', 'HanXRQChr09g0262391' => 'han', 'HanXRQChr10g0286211' => 'han', 'HanXRQChr10g0316131' => 'han', 'HanXRQChr10g0316141' => 'han', 'HanXRQChr10g0316151' => 'han', 'HanXRQChr10g0316181' => 'han', 'HanXRQChr13g0398481' => 'han', 'HanXRQChr14g0443101' => 'han', 'HanXRQChr14g0443831' => 'han', 'HanXRQChr14g0443861' => 'han', 'HanXRQChr14g0443891' => 'han', 'HanXRQChr14g0443911' => 'han', 'HanXRQChr14g0444151' => 'han', 'HanXRQChr14g0444161' => 'han', 'HanXRQChr15g0477311' => 'han', 'HanXRQChr16g0531951' => 'han', 'HanXRQChr16g0531961' => 'han', 'Haze_03632' => 'cav', 'Haze_03645' => 'cav', 'Haze_11033' => 'cav', 'Haze_14206' => 'cav', 'Haze_21211' => 'cav', 'Haze_22872' => 'cav', 'Hma1.2p1_0034F.1_g021630' => 'hma', 'Hma1.2p1_0034F.1_g021640' => 'hma', 'Hma1.2p1_0085F.1_g044510' => 'hma', 'Hma1.2p1_0489F.1_g164150' => 'hma', 'Hma1.2p1_0489F.1_g164160' => 'hma', 'Hma1.2p1_0500F.1_g166920' => 'hma', 'HPP92_007462' => 'vpl', 'HPP92_014357' => 'vpl', 'HPP92_019764' => 'vpl', 'HPP92_022535' => 'vpl', 'HPP92_022536' => 'vpl', 'HPP92_022545' => 'vpl', 'HPP92_022546' => 'vpl', 'HPP92_022735' => 'vpl', 'HPP92_022737' => 'vpl', 'HPP92_022738' => 'vpl', 'HPP92_027369' => 'vpl', 'HPP92_027789' => 'vpl', 'HPP92_028790' => 'vpl', 'Hund03568' => 'sun', 'Hund03571' => 'sun', 'Hund03572' => 'sun', 'Hund03683' => 'sun', 'Hund19677' => 'sun', 'Hund19678' => 'sun', 'Hund19689' => 'sun', 'Lalb_Chr01g0023991' => 'lal', 'Lalb_Chr04g0258621' => 'lal', 'Lalb_Chr05g0214891' => 'lal', 'Lalb_Chr05g0229451' => 'lal', 'Lalb_Chr05g0229461' => 'lal', 'Lalb_Chr05g0229551' => 'lal', 'Lalb_Chr05g0229561' => 'lal', 'Lalb_Chr05g0229571' => 'lal', 'Lalb_Chr07g0195481' => 'lal', 'Lalb_Chr09g0324781' => 'lal', 'Lalb_Chr09g0324791' => 'lal', 'Lalb_Chr10g0095511' => 'lal', 'Lalb_Chr10g0095521' => 'lal', 'Lalb_Chr16g0380241' => 'lal', 'Lalb_Chr17g0338721' => 'lal', 'Lalb_Chr19g0123881' => 'lal', 'Lalb_Chr19g0126821' => 'lal', 'Lj1g0004424' => 'lja', 'Lj2A501T57' => 'lonja', 'Lj2A55G23' => 'lonja', 'Lj2g0002933' => 'lja', 'Lj2g0014978' => 'lja', 'Lj2g0027850' => 'lja', 'Lj2P436T23' => 'lonja', 'Lj3g0001327' => 'lja', 'Lj3g0012747' => 'lja', 'Lj4A238T81' => 'lonja', 'Lj4A812T70' => 'lonja', 'Lj4C245G2' => 'lonja', 'Lj4C3T18' => 'lonja', 'Lj4g0000594' => 'lja', 'Lj4g0018444' => 'lja', 'Lj4g0019262' => 'lja', 'Lj4P179T23' => 'lonja', 'Lj5g0003648' => 'lja', 'Lj5g0013173' => 'lja', 'Lsat_1_v5_gn_2_61140' => 'lsa', 'Lsat_1_v5_gn_2_62420' => 'lsa', 'Lsat_1_v5_gn_2_72981' => 'lsa', 'Lsat_1_v5_gn_2_73001' => 'lsa', 'Lsat_1_v5_gn_2_73021' => 'lsa', 'Lsat_1_v5_gn_2_73061' => 'lsa', 'Lsat_1_v5_gn_2_73081' => 'lsa', 'Lsat_1_v5_gn_2_73101' => 'lsa', 'Lsat_1_v5_gn_2_73941' => 'lsa', 'Lsat_1_v5_gn_2_73961' => 'lsa', 'Lsat_1_v5_gn_3_54441' => 'lsa', 'Lsat_1_v5_gn_3_69900' => 'lsa', 'Lsat_1_v5_gn_3_69920' => 'lsa', 'Lsat_1_v5_gn_3_69940' => 'lsa', 'Lsat_1_v5_gn_4_155220' => 'lsa', 'Lsat_1_v5_gn_4_49801' => 'lsa', 'Lsat_1_v5_gn_9_39901' => 'lsa', 'Lsat_1_v5_gn_9_82600' => 'lsa', 'Manes.01G114600' => 'mes', 'Manes.01G156600' => 'mes', 'Manes.01G158000' => 'mes', 'Manes.02G115200' => 'mes', 'Manes.02G117300' => 'mes', 'Manes.06G061600' => 'mes', 'Manes.09G121000' => 'mes', 'Manes.14G135400' => 'mes', 'Manes.18G001300' => 'mes', 'Mapoly0055s0125' => 'mpo', 'Mapoly0092s0043' => 'mpo', 'Mapoly0134s0020' => 'mpo', 'MBI01_g22966_MAGBIO' => 'mbi', 'MBI01_g22967_MAGBIO' => 'mbi', 'MBI01_g22968_MAGBIO' => 'mbi', 'MBI08_g06883_MAGBIO' => 'mbi', 'MBI10_g07298_MAGBIO' => 'mbi', 'MBI10_g20066_MAGBIO' => 'mbi', 'MBI15_g31020_MAGBIO' => 'mbi', 'MCO11G156' => 'mco', 'MD02G1113800' => 'mdo', 'MD04G1178500' => 'mdo', 'MD05G1225700' => 'mdo', 'MD05G1225800' => 'mdo', 'MD05G1225900' => 'mdo', 'MD05G1226200' => 'mdo', 'MD06G1002600' => 'mdo', 'MD06G1002700' => 'mdo', 'MD12G1194000' => 'mdo', 'MD13G1027800' => 'mdo', 'MD15G1228900' => 'mdo', 'MD17G1281100' => 'mdo', 'Medtr1g108390' => 'mtr', 'Medtr3g074530' => 'mtr', 'Medtr5g024520' => 'mtr', 'Medtr5g024560' => 'mtr', 'Medtr5g024580' => 'mtr', 'Medtr5g024640' => 'mtr', 'Medtr5g024660' => 'mtr', 'Medtr5g024960' => 'mtr', 'Medtr5g024970' => 'mtr', 'Medtr5g054950' => 'mtr', 'Medtr7g074190' => 'mtr', 'Medtr8g006775' => 'mtr', 'Medtr8g006780' => 'mtr', 'Medtr8g006935' => 'mtr', 'Medtr8g072560' => 'mtr', 'Medtr8g073160' => 'mtr', 'MELO3C005311.2' => 'cme', 'MELO3C013710.2' => 'cme', 'MELO3C013711.2' => 'cme', 'MELO3C017060.2' => 'cme', 'MELO3C025264.2' => 'cme', 'Migut.C00349' => 'egut', 'Migut.E00409' => 'egut', 'Migut.H00258' => 'egut', 'Migut.H02207' => 'egut', 'Migut.H02209' => 'egut', 'Migut.J00007' => 'egut', 'MSTRG.15600' => 'ama', 'MSTRG.15601' => 'ama', 'MSTRG.23607' => 'ama', 'MSTRG.24903' => 'ama', 'MSTRG.3535' => 'ama', 'MSTRG.3633' => 'ama', 'MSTRG.5478' => 'ama', 'Nitab4.5_0000195g0010' => 'nta', 'Nitab4.5_0000235g0110' => 'nta', 'Nitab4.5_0000304g0030' => 'nta', 'Nitab4.5_0000464g0020' => 'nta', 'Nitab4.5_0000495g0070' => 'nta', 'Nitab4.5_0000855g0210' => 'nta', 'Nitab4.5_0001309g0170' => 'nta', 'Nitab4.5_0001309g0180' => 'nta', 'Nitab4.5_0001467g0140' => 'nta', 'Nitab4.5_0001629g0060' => 'nta', 'Nitab4.5_0002456g0140' => 'nta', 'Nitab4.5_0002860g0010' => 'nta', 'Nitab4.5_0003037g0140' => 'nta', 'Nitab4.5_0003141g0060' => 'nta', 'Nitab4.5_0003423g0080' => 'nta', 'Nitab4.5_0003598g0030' => 'nta', 'Nitab4.5_0004009g0040' => 'nta', 'Nitab4.5_0004944g0030' => 'nta', 'Nitab4.5_0005948g0010' => 'nta', 'Nitab4.5_0006134g0040' => 'nta', 'Nitab4.5_0007384g0040' => 'nta', 'Nitab4.5_0007384g0050' => 'nta', 'Nitab4.5_0008533g0020' => 'nta', 'Nn3g18047' => 'nnu', 'Nn3g18049' => 'nnu', 'Nn3g18050' => 'nnu', 'Nn4g24067' => 'nnu', 'Nn5g26769' => 'nnu', 'Nn5g31018' => 'nnu', 'Nn5g31063' => 'nnu', 'Nn6g31603' => 'nnu', 'Nn6g31670' => 'nnu', 'Nn6g31671' => 'nnu', 'Oeu011398.1' => 'oeu', 'Oeu012455.1' => 'oeu', 'Oeu012543.1' => 'oeu', 'Oeu026926.1' => 'oeu', 'Oeu027182.2' => 'oeu', 'Oeu035762.1' => 'oeu', 'Oeu044336.1' => 'oeu', 'Oeu047426.1' => 'oeu', 'Oeu053876.1' => 'oeu', 'Oeu064729.3' => 'oeu', 'Os01g0818000' => 'osa', 'Os05g0481900' => 'osa', 'Os08g0191000' => 'osa', 'Os09g0491740' => 'osa', 'Os09g0554300' => 'osa', 'Os09g0555100' => 'osa', 'Peaxi162Scf00040g03133' => 'pax', 'Peaxi162Scf00064g01428' => 'pax', 'Peaxi162Scf00064g01429' => 'pax', 'Peaxi162Scf00122g02518' => 'pax', 'Peaxi162Scf00205g00043' => 'pax', 'Peaxi162Scf00374g00514' => 'pax', 'Peaxi162Scf00385g00415' => 'pax', 'Peaxi162Scf00385g00518' => 'pax', 'Peaxi162Scf00732g00014' => 'pax', 'Peaxi162Scf00803g00311' => 'pax', 'Peaxi162Scf00918g00416' => 'pax', 'Peaxi162Scf00920g00034' => 'pax', 'Peaxi162Scf00981g00317' => 'pax', 'PGR004G1380' => 'pgr', 'PGR042G1070' => 'pgr', 'PGR102G1873' => 'pgr', 'PGR119G0282' => 'pgr', 'PGR119G0524' => 'pgr', 'PGR119G0613' => 'pgr', 'PGR119G0706' => 'pgr', 'PGR119G2522' => 'pgr', 'PGSC0003DMG400009927' => 'stu', 'PGSC0003DMG400013649' => 'stu', 'PGSC0003DMG400017870' => 'stu', 'PGSC0003DMG400018668' => 'stu', 'PGSC0003DMG400018678' => 'stu', 'PGSC0003DMG400027696' => 'stu', 'PGSC0003DMG400029398' => 'stu', 'PGSC0003DMG400030639' => 'stu', 'Phvul.002G117700' => 'pvu', 'Phvul.002G119300' => 'pvu', 'Phvul.003G029200' => 'pvu', 'Phvul.003G271200' => 'pvu', 'Phvul.003G272300' => 'pvu', 'Phvul.008G078601' => 'pvu', 'Phvul.010G051100' => 'pvu', 'Phvul.010G051200' => 'pvu', 'Phvul.010G051500' => 'pvu', 'Phvul.011G144150' => 'pvu', 'Phvul.L001693' => 'pvu', 'Potri.001G125501' => 'ptr', 'Potri.001G456300' => 'ptr', 'Potri.001G456400' => 'ptr', 'Potri.002G003500' => 'ptr', 'Potri.003G108100' => 'ptr', 'Potri.004G093200' => 'ptr', 'Potri.005G099300' => 'ptr', 'Potri.006G112200' => 'ptr', 'Potri.008G127700' => 'ptr', 'Potri.010G115200' => 'ptr', 'Potri.011G145600' => 'ptr', 'Potri.011G145700' => 'ptr', 'Potri.016G141700' => 'ptr', 'Potri.017G122400' => 'ptr', 'Pp3c15_15840' => 'ppa', 'Pp3c15_19690' => 'ppa', 'Pp3c19_9690' => 'ppa', 'Pp3c19_9720' => 'ppa', 'Pp3c22_21270' => 'ppa', 'Pp3c7_11130' => 'ppa', 'Pp3c9_19600' => 'ppa', 'PRCOL_00004401' => 'pco', 'Prupe.1G322300' => 'ppe', 'Prupe.3G151300' => 'ppe', 'Prupe.5G004000' => 'ppe', 'Prupe.5G004100' => 'ppe', 'Prupe.5G004300' => 'ppe', 'Prupe.6G298500' => 'ppe', 'Prupe.7G185200' => 'ppe', 'Psat0s2032g0040' => 'psa', 'Psat0s2032g0120' => 'psa', 'Psat0s2423g0040' => 'psa', 'Psat2g147240' => 'psa', 'Psat2g148400' => 'psa', 'Psat3g117040' => 'psa', 'Psat4g104560' => 'psa', 'Psat4g107480' => 'psa', 'Psat4g224160' => 'psa', 'Psat4g225160' => 'psa', 'Psat4g225200' => 'psa', 'Psat4g225720' => 'psa', 'Psat4g225760' => 'psa', 'Psat6g139040' => 'psa', 'Psat6g221720' => 'psa', 'PSO170G0425' => 'pso', 'PSO170G1568' => 'pso', 'PSO210G4469' => 'pso', 'PSO210G5604' => 'pso', 'PSO339G4487' => 'pso', 'PSO339G5375' => 'pso', 'PSO357G0024' => 'pso', 'PSO384G0733' => 'pso', 'PSO513G0079' => 'pso', 'PSO541G1773' => 'pso', 'PSO675G1545' => 'pso', 'PSO675G1853' => 'pso', 'QL01p002173' => 'qlo', 'QL01p002230' => 'qlo', 'QL02p015977' => 'qlo', 'QL04p025390' => 'qlo', 'QL04p025418' => 'qlo', 'QL04p025430' => 'qlo', 'QL06p053224' => 'qlo', 'QL06p053388' => 'qlo', 'QL06p053397' => 'qlo', 'QL07p031389' => 'qlo', 'RcHm_v2.0_Chr1g0350291' => 'rch', 'RcHm_v2.0_Chr2g0096951' => 'rch', 'RcHm_v2.0_Chr3g0459731' => 'rch', 'RcHm_v2.0_Chr3g0465941' => 'rch', 'RcHm_v2.0_Chr3g0493591' => 'rch', 'RcHm_v2.0_Chr4g0399931' => 'rch', 'RcHm_v2.0_Chr4g0414971' => 'rch', 'RcHm_v2.0_Chr4g0440881' => 'rch', 'RcHm_v2.0_Chr6g0256401' => 'rch', 'RcHm_v2.0_Chr7g0217021' => 'rch', 'RcHm_v2.0_Chr7g0217081' => 'rch', 'RcHm_v2.0_Chr7g0217111' => 'rch', 'RcHm_v2.0_Chr7g0217141' => 'rch', 'RcHm_v2.0_Chr7g0217151' => 'rch', 'RcHm_v2.0_Chr7g0217181' => 'rch', 'RcHm_v2.0_Chr7g0219341' => 'rch', 'RcHm_v2.0_Chr7g0219351' => 'rch', 'Rhsim04G0120300' => 'rsi', 'Rhsim05G0234100' => 'rsi', 'Rhsim06G0002300' => 'rsi', 'Rhsim08G0026700' => 'rsi', 'Rhsim09G0100700' => 'rsi', 'Rhsim10G0078300' => 'rsi', 'Rhsim10G0190900' => 'rsi', 'Sabra01G0096600' => 'sbr', 'Sabra02G0002300' => 'sbr', 'Sabra04G0158000' => 'sbr', 'Sabra05G0081800' => 'sbr', 'Sabra06G0087500' => 'sbr', 'Sabra10G0085200' => 'sbr', 'Sabra11G0130600' => 'sbr', 'Sabra11G0130700' => 'sbr', 'Sabra11G0130800' => 'sbr', 'Sabra16G0308600' => 'sbr', 'Sabra16G0308700' => 'sbr', 'Sabra17G0101200' => 'sbr', 'Sabra17G0103800' => 'sbr', 'SalBow3G0694' => 'sbo', 'SalBow3G0810' => 'sbo', 'SalBow3G0826' => 'sbo', 'SalBow3G1777' => 'sbo', 'SalBow3G1987' => 'sbo', 'SalBow3G3703' => 'sbo', 'SalBow3G3705' => 'sbo', 'SalBow3G4283' => 'sbo', 'SalBow5G1934' => 'sbo', 'SalBow5G2641' => 'sbo', 'SalBow7G2118' => 'sbo', 'SalBow7G3253' => 'sbo', 'Sc03g0004160' => 'sci', 'Sc03g0004170' => 'sci', 'Sc04g0005720' => 'sci', 'Sc07g0001420' => 'sci', 'Sc10g0000960' => 'sci', 'Sc20g0007320' => 'sci', 'Sc20g0007550' => 'sci', 'Sed0003982' => 'sed', 'Sed0015708' => 'sed', 'Sed0020841' => 'sed', 'Sed0024000' => 'sed', 'Sed0025940' => 'sed', 'Sed0027043' => 'sed', 'Sed0027389' => 'sed', 'SEGI_01192' => 'sgi', 'SEGI_02849' => 'sgi', 'SEGI_06771' => 'sgi', 'SEGI_10114' => 'sgi', 'SEGI_11342' => 'sgi', 'SEGI_17888' => 'sgi', 'SEGI_18248' => 'sgi', 'SEGI_18860' => 'sgi', 'SEGI_21981' => 'sgi', 'SEGI_24587' => 'sgi', 'SEGI_25481' => 'sgi', 'SEGI_26535' => 'sgi', 'SEGI_29717' => 'sgi', 'SEGI_37299' => 'sgi', 'SEGI_40371' => 'sgi', 'SEGI_41579' => 'sgi', 'SGA_v2.0_scaffold26G11249' => 'sas', 'SGA_v2.0_scaffold2G00955' => 'sas', 'SGA_v2.0_scaffold37G14578' => 'sas', 'SGA_v2.0_scaffold49G18134' => 'sas', 'SHI12953' => 'shi', 'SHI12956' => 'shi', 'SHI12957' => 'shi', 'SHI16340' => 'shi', 'SMO232G0044' => 'smo', 'SMO239G0091' => 'smo', 'SMO266G0105' => 'smo', 'SMO353G0038' => 'smo', 'SMO367G0864' => 'smo', 'Solyc02g037550.3' => 'sly', 'Solyc02g082450.3' => 'sly', 'Solyc02g091240.1' => 'sly', 'Solyc03g031990.4' => 'sly', 'Solyc03g032075.1' => 'sly', 'Solyc03g032080.4' => 'sly', 'Solyc04g082830.3' => 'sly', 'Solyc10g074790.2' => 'sly', 'Solyc12g095750.2' => 'sly', 'Sopen02g011960' => 'spe', 'Sopen02g027140' => 'spe', 'Sopen02g035860' => 'spe', 'Sopen03g005840' => 'spe', 'Sopen03g005930' => 'spe', 'Sopen04g036470' => 'spe', 'Sopen10g027280' => 'spe', 'Sopen12g031650' => 'spe', 'Sp1g18630' => 'spa', 'Sp1g38050' => 'spa', 'Sp2g30710' => 'spa', 'Sp3g30850' => 'spa', 'Sp5g26260' => 'spa', 'Sp5g31680' => 'spa', 'Sp5g31690' => 'spa', 'TAR369G0515' => 'tar', 'TAR376G0715' => 'tar', 'TAR622G0310' => 'tar', 'TAR622G1088' => 'tar', 'TAR623G0868' => 'tar', 'TAR628G1382' => 'tar', 'TAR636G1615' => 'tar', 'THA.LOC104805898' => 'tha', 'THA.LOC104807422' => 'tha', 'THA.LOC104816150' => 'tha', 'THA.LOC104819711' => 'tha', 'THA.LOC104821357' => 'tha', 'THA.LOC109116677' => 'tha', 'Thecc.01G001200' => 'tca', 'Thecc.01G003300' => 'tca', 'Thecc.02G278600' => 'tca', 'Thecc.04G124400' => 'tca', 'Thecc.04G146800' => 'tca', 'Thecc.08G098600' => 'tca', 'Thecc.10G001200' => 'tca', 'Thecc.10G001300' => 'tca', 'Thecc.10G096400' => 'tca', 'Thecc.10G096500' => 'tca', 'Thecc.10G096600' => 'tca', 'Thecc.10G096700' => 'tca', 'Thecc.10G096800' => 'tca', 'Thecc.10G096900' => 'tca', 'Thecc.10G097000' => 'tca', 'Thecc.10G097300' => 'tca', 'Thhalv10005581m.g' => 'esa', 'Thhalv10009415m.g' => 'esa', 'Thhalv10009963m.g' => 'esa', 'Thhalv10013614m.g' => 'esa', 'Thhalv10018516m.g' => 'esa', 'Thhalv10018685m.g' => 'esa', 'Thhalv10022717m.g' => 'esa', 'TPR.G13723' => 'tpr', 'TPR.G13738' => 'tpr', 'TPR.G22686' => 'tpr', 'TPR.G24309' => 'tpr', 'TPR.G25319' => 'tpr', 'TPR.G33744' => 'tpr', 'TPR.G33883' => 'tpr', 'TPR.G35827' => 'tpr', 'TPR.G35957' => 'tpr', 'TPR.G38263' => 'tpr', 'TPR.G4887' => 'tpr', 'TWI36G1379' => 'twi', 'TWI53G0989' => 'twi', 'TWI53G1967' => 'twi', 'TWI56G0290' => 'twi', 'TWI73G1200' => 'twi', 'TWI74G0087' => 'twi', 'TWI75G0446' => 'twi', 'TWI77G0231' => 'twi', 'unitig_0.g2005' => 'ugi', 'unitig_26.g9846' => 'ugi', 'unitig_27.g24897' => 'ugi', 'unitig_32.g11839' => 'ugi', 'unitig_748.g8690' => 'ugi', 'vmacro08957' => 'vma', 'vmacro18468' => 'vma', 'vmacro20399' => 'vma', 'vmacro20402' => 'vma', 'vmacro20403' => 'vma', 'vmacro21747' => 'vma', 'VMungo0251G2256' => 'vmu', 'VMungo0251G2325' => 'vmu', 'VMungo0251G2770' => 'vmu', 'VMungo0331G0681' => 'vmu', 'VMungo0331G1401' => 'vmu', 'VMungo0331G1535' => 'vmu', 'VMungo0331G1584' => 'vmu', 'VMungo0331G1834' => 'vmu', 'VMungo0720G1894' => 'vmu', 'VMungo1215G0581' => 'vmu', 'VMungo1215G1234' => 'vmu', 'VMungo1383G0880' => 'vmu', 'Zm00001eb110990' => 'zma', 'Zm00001eb114230' => 'zma', 'Zm00001eb126590' => 'zma', 'Zm00001eb149720' => 'zma', 'Zm00001eb184320' => 'zma', 'Zm00001eb312840' => 'zma', 'Zm00001eb316860' => 'zma', 'Zm00001eb320680' => 'zma', 'Zm00001eb418080' => 'zma', 'Zm00001eb422020' => 'zma' ) $gf_id = 'HOM05D000534' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000534' ) $data_identifier = 'HOM05D000534' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 10, 'amhyb' => (int) 10, 'aly' => (int) 6, 'aox' => (int) 9, 'arhy' => (int) 30, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 18, 'cqu' => (int) 23, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 11, 'can' => (int) 7, 'cansat' => (int) 7, 'chi' => (int) 7, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 9, 'cde' => (int) 5, 'cfa' => (int) 8, 'ccl' => (int) 12, 'cil' => (int) 17, 'cla' => (int) 6, 'col' => (int) 15, 'cpa' => (int) 4, 'cre' => (int) 2, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 12, 'egr' => (int) 11, 'fan' => (int) 23, 'fve' => (int) 7, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 14, 'han' => (int) 19, 'cav' => (int) 6, 'hma' => (int) 6, 'vpl' => (int) 13, 'sun' => (int) 7, 'lal' => (int) 17, 'lja' => (int) 11, 'lonja' => (int) 8, 'lsa' => (int) 18, 'mes' => (int) 9, 'mpo' => (int) 3, 'mbi' => (int) 7, 'mco' => (int) 1, 'mdo' => (int) 12, 'mtr' => (int) 16, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 7, 'nta' => (int) 23, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 6, 'pax' => (int) 13, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 11, 'ptr' => (int) 14, 'ppa' => (int) 7, 'pco' => (int) 1, 'ppe' => (int) 7, 'psa' => (int) 15, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 17, 'rsi' => (int) 7, 'sbr' => (int) 13, 'sbo' => (int) 12, 'sci' => (int) 7, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 4, 'shi' => (int) 4, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 6, 'tca' => (int) 16, 'esa' => (int) 7, 'tpr' => (int) 11, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 12, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb422020' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1